DUMPFormatter

class sknano.io.DUMPFormatter(style=None, dumpattrs=None, dumpattrmap=None, atomattrmap=None)[source] [edit on github][source]

Bases: sknano.io.StructureIOFormatter

Class defining the structure file format for LAMMPS dump.

Parameters:
  • style (str, optional) –
  • dumpattrs (list, optional) –
  • dumpattrmap (class:dict) – Python dict mapping custom dump attributes to Atom attributes.
  • atomattrmap (dict) – dict mapping atom type to atom element
style
dumpattrs2index

Attributes

atomattrs List of dump atom attributes.
attr_dtypes List of dump atom attributes.
dumpattrs List of dump attributes.
fmtstr Format string.
otherattrs List of other dump atom attributes.

Methods

atomattrs2str() Return a space-separated string of parsed atom attributes.
dumpattrs2str() Return a space-separated string of the dumped atom attributes.
format(attrs[, attr_dtypes]) Return str of dump attributes formatted for an output stream.
remapdumpattrs(dumpattrs, dumpattrmap) Rename attributes in the DUMPFormatter.dumpattrs list.
todict() Return dict of constructor parameters.

Attributes Summary

atomattrs List of dump atom attributes.
attr_dtypes List of dump atom attributes.
dumpattrs List of dump attributes.
otherattrs List of other dump atom attributes.

Methods Summary

atomattrs2str() Return a space-separated string of parsed atom attributes.
dumpattrs2str() Return a space-separated string of the dumped atom attributes.
format(attrs[, attr_dtypes]) Return str of dump attributes formatted for an output stream.
remapdumpattrs(dumpattrs, dumpattrmap) Rename attributes in the DUMPFormatter.dumpattrs list.
todict() Return dict of constructor parameters.

Attributes Documentation

atomattrs

List of dump atom attributes.

attr_dtypes

List of dump atom attributes.

dumpattrs

List of dump attributes.

otherattrs

List of other dump atom attributes.

Methods Documentation

atomattrs2str()[source] [edit on github][source]

Return a space-separated string of parsed atom attributes.

dumpattrs2str()[source] [edit on github][source]

Return a space-separated string of the dumped atom attributes.

format(attrs, attr_dtypes=None)[source] [edit on github][source]

Return str of dump attributes formatted for an output stream.

Parameters:attrs (list) – List of dump attribute values.
remapdumpattrs(dumpattrs, dumpattrmap)[source] [edit on github][source]

Rename attributes in the DUMPFormatter.dumpattrs list.

Parameters:dumpattrmap (dict) – dict mapping atom attribute name to new attribute name.
todict()[source] [edit on github][source]

Return dict of constructor parameters.